rs32174446 SNP Detail

Summary

• ID
  rs32174446
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134483234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGAGG GGCAGGGTTT GGGACTATAC
  R
  TAGCTCTGCT GTAGTTCCAG TCTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45115341	mCV23638948	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss319983147	CHEV_1_136452073	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs32174446					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134483234 () rs orientation: forward

Symbol	Name	Function Class
Cpgi772	CpG island 772	677 bp proximal
Gm57134	predicted gene, 57134	620 bp downstream
Rr367005	regulatory region 367005	1464 bp upstream
Rr418945	regulatory region 418945	within coordinates
Rr418946	regulatory region 418946	474 bp proximal
Rr418947	regulatory region 418947	917 bp proximal
Rr418948	regulatory region 418948	1596 bp proximal
Tssr13798	transcription start site region 13798	1491 bp downstream