rs32174460 SNP Detail

Summary

• ID
  rs32174460
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30259372 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGAGGCTCA AGACGGAGGT AATGCGCCTG CGCCGCAAGG
  AGCACTATGG GAAGCAAAGA CTCAGACATC CCAAGGCTTT TCGGGATTTG TAGTGTTATA
  Y
  TTTAGTATTG CCACTAAACC TATTTCCAGC TCCTAAGTAA CTATCATAGT CACTGACATC
  CTTCACAGGA AGATCATTCT GGAGACGGAC TGGATCCTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46114043	mCV25394666	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss148682495	ENSMUSSNP1264651	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss322135266	CHEV_7_31344966	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32174460					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30259372 () rs orientation: forward

Symbol	Name	Function Class
Lin37	lin-37 DREAM MuvB core complex component	109 bp upstream
Psenen	presenilin enhancer gamma secretase subunit	1918 bp downstream
Rr400243	regulatory region 400243	51 bp downstream
Tssr71791	transcription start site region 71791	1200 bp upstream
Tssr71792	transcription start site region 71792	1162 bp upstream
Tssr71793	transcription start site region 71793	416 bp upstream
Tssr71794	transcription start site region 71794	295 bp upstream
Tssr71795	transcription start site region 71795	105 bp upstream