rs32177134 SNP Detail

Summary

• ID
  rs32177134
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:100307270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTAGCTCA CCTTAAATCC
  AGCCACTGCT CCAGACTGCA AATCAGATTC GATGTTTCCT GGGTCTAGGT AGGCAATGCT
  CATAAGAAAG CCAGGCCCCG TGAACGCCCA GAGTTTACGA AAGCTAAAAC AAGAGTACTA
  TAAAGGAGAG AGGAGAGCGG TCTGAGTGTC ACCCGTCCTA ACGTCTCTAT TTTATCACAC
  R
  TCACGGAGCG ACCCCAGTGG CACAGGGCCA GGGTGGGCTC TGCGCGAGTC CCCATTTCAC
  ATCCAGTTCG TCCACTTTTT ACCAATAAGA TGGCCTCTTC TCTCAGTGGG AGTCCTTCCT
  TTATCTGCTC TCCATAAGCA ACTTGGTCCA AACTGAACCC ACCCACTTCC CACATAGGAG
  CAAAACCACA CTTGAAAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	NZW/LacJ	WSB/EiJ
ss48133907	NES12133128	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	G	G	A	A	A	G	G
ss148475065	ENSMUSSNP1363867	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	NZW/LacJ	WSB/EiJ
rs32177134					SNP	G	G	A	A	G	G	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48133907	NES12133128	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100307270 () rs orientation: forward

Symbol	Name	Function Class
Rr509705	regulatory region 509705	1221 bp proximal
Slc11a2	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	Intron
Tssr136419	transcription start site region 136419	770 bp downstream