rs32177136 SNP Detail

Summary

• ID
  rs32177136
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:100307276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACCTTAA ATCCAGCCAC
  TGCTCCAGAC TGCAAATCAG ATTCGATGTT TCCTGGGTCT AGGTAGGCAA TGCTCATAAG
  AAAGCCAGGC CCCGTGAACG CCCAGAGTTT ACGAAAGCTA AAACAAGAGT ACTATAAAGG
  AGAGAGGAGA GCGGTCTGAG TGTCACCCGT CCTAACGTCT CTATTTTATC ACACATCACG
  R
  AGCGACCCCA GTGGCACAGG GCCAGGGTGG GCTCTGCGCG AGTCCCCATT TCACATCCAG
  TTCGTCCACT TTTTACCAAT AAGATGGCCT CTTCTCTCAG TGGGAGTCCT TCCTTTATCT
  GCTCTCCATA AGCAACTTGG TCCAAACTGA ACCCACCCAC TTCCCACATA GGAGCAAAAC
  CACACTTGAA AGAGAAGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48133909	NES12133129	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A	G		A	A		A
ss148475068	ENSMUSSNP218496	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G				G
ss325083094	CHEV_15_100239826	CHEVERUD	SCREENING_POP	f	SNP								G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32177136					SNP	A	A	G	G	G	A	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48133909	NES12133129	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100307276 () rs orientation: forward

Symbol	Name	Function Class
Rr509705	regulatory region 509705	1215 bp proximal
Slc11a2	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	Intron
Tssr136419	transcription start site region 136419	764 bp downstream