rs32177145 SNP Detail

Summary

• ID
  rs32177145
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:40504356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCT GTATTAGATT AGGAAGGGAA
  S
  GAGCCGTCCT ACTGTCCAGT TTGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45115886	mCV24153043	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss148982309	ENSMUSSNP1323413	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32177145					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:40504356 () rs orientation: forward

Symbol	Name	Function Class
Il1rl1	interleukin 1 receptor-like 1	within coordinates
Il18r1	interleukin 18 receptor 1	356 bp upstream
Rr16188	regulatory region 16188	245 bp proximal
Rr29358	regulatory region 29358	444 bp proximal
Rr33590	regulatory region 33590	1845 bp proximal
Rr371160	regulatory region 371160	57 bp upstream
Tssr6465	transcription start site region 6465	445 bp upstream
Tssr6466	transcription start site region 6466	507 bp upstream
Tssr6467	transcription start site region 6467	769 bp upstream
Tssr6468	transcription start site region 6468	780 bp upstream
Tssr6469	transcription start site region 6469	873 bp upstream
Tssr6470	transcription start site region 6470	892 bp upstream
Tssr6471	transcription start site region 6471	984 bp upstream
Tssr6472	transcription start site region 6472	1098 bp upstream