rs32179809 SNP Detail

Summary

• ID
  rs32179809
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:77042613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATGATGT AATTTAAAAA
  AAAATCAATG ATAGAACCAA AACAGAACTA AAACTAAAAC AGAAGAATGG TGCTTTTAAG
  AATAGCTTCT CTGGGGCCCA ACACTCGGCC CAGGATAAGT CCGGTTTCTT CTGTGGAGGG
  TACACAGTTA AAGCCTTGAT TTCCTGGATC TGGTAACATG GCAAAAGATG TGTGGCGTCC
  Y
  TTGTCACCAT CCACCGTTCC ACAGTGAACA CACTTGGAAA GCAGCTTTTG CCAAAAACCT
  TCGGACAGTC CAATGTCAAT GTCACACAGC AAGTGGTGAT TGGCACGCCT CACAGTCCTG
  CAGCATCCAA CACTATTGTG GTAGGGAGCC CACACTCTCC CAACACTCAC TTTGTGTCCC
  AGAATCAGAC GTCTGACTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45116591	mCV23073656	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss144722415	ENSMUSSNP5112412	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32179809					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:77042613 () rs orientation: forward

Symbol	Name	Function Class
Gm70876	predicted gene, 70876	within coordinates
Tfdp1-ps	transcription factor Dp 1, pseudogene	within coordinates
Tssr7562	transcription start site region 7562	98 bp downstream