rs32182048 SNP Detail

Summary

• ID
  rs32182048
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78137189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTTCATGCAT ACATATGAGT
  R
  TGTGTGTACC TGTACACACC TTTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39372067	mCV27572909	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148180875	ENSMUSSNP146947	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss325024231	CHEV_15_78083419	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32182048					SNP	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78137189 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7285	CpG island 7285	1747 bp proximal
Ncf4	neutrophil cytosolic factor 4	within coordinates
Rr505232	regulatory region 505232	1159 bp distal
Rr505233	regulatory region 505233	1051 bp distal
Rr505234	regulatory region 505234	1975 bp proximal
Tssr131904	transcription start site region 131904	232 bp upstream
Tssr131905	transcription start site region 131905	283 bp upstream
Tssr131906	transcription start site region 131906	1875 bp upstream