rs32183311 SNP Detail

Summary

• ID
  rs32183311
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191824125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTG CATTCACCTT TGGGGAAGGA
  K
  TTTGGCGTGA AGGGATGTGT GTGTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45116136	mCV23925735	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss146513885	ENSMUSSNP2959901	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320197040	CHEV_1_193963710	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32183311					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191824125 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1232	CpG island 1232	916 bp distal
Gm10516	predicted gene 10516	within coordinates
Rcor3	REST corepressor 3	1766 bp upstream
Rr29207	regulatory region 29207	324 bp distal
Tssr15824	transcription start site region 15824	1895 bp upstream
Tssr15825	transcription start site region 15825	1861 bp upstream
Tssr15826	transcription start site region 15826	1781 bp upstream