rs32183536 SNP Detail

Summary

• ID
  rs32183536
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20986458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGAGAGG GCCCCGACCC
  ATTGTGAGTG GTGCCATCTC TGGGTTGGTG GTCCTGGGTC CCGGGTTATA AGAAAGCAGG
  CTGAGCAAGC CAGGAGGATC AAGCCTTACA GTGGTACCCC TCCATGGCCT CTGCATCAGC
  TCCTGCCTCC AGGAGCCTGC CCTGTTTGAG TTCCTGTCCT CACTGCCTTT GGTGATGAAC
  R
  GCAATGTGGA AAGTGTAAGA TGAATAAACC CTTTCCTCCC AGAATTGCTT TTTGGCCCTA
  GTATTCCATT GCAGCAATAG AAACCCTAAC TAAGAAAGGA GCGAAAGAGT AAAAGTCCAG
  TGAATTCAGC AGACACTCTG GGTTCTCACT GGAGAGGAAA AAGAATTTAA TCCCATGTAA
  CACAGTATTT ATCTCTAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45116732	mCV24135290	ABI	CRAMUS_MOUSE	f	SNP	A		G	G
ss148726320	ENSMUSSNP6696608	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G		A
ss319654638	CHEV_1_20906315	CHEVERUD	SCREENING_POP	f	SNP					G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32183536					SNP	A	A	G	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20986458 () rs orientation: forward

Symbol	Name	Function Class
Gm24171	predicted gene, 24171	694 bp upstream
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Tssr6058	transcription start site region 6058	1606 bp upstream
Tssr6059	transcription start site region 6059	1622 bp upstream