rs32183755 SNP Detail

Summary

• ID
  rs32183755
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:142419067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACCAAACT CCTACACTCT
  CTGGATGCTT ATTTTGTCAT TGGCAGAAGC ACAAGCAGGA GTTTCCCTCA GACACAAGCA
  GTTTTCCACA GACTGCACGG TGGTGCCTAG AGTCTACCCC AGCCTGTGCC TAGCTGTGCT
  CTTCCCTCTG CCTCTCCTTA TCTAGAACTC TGAGTTTTAT TCCCACTTAT TTTATTCTAA
  M
  TGTACAAGCT GGATTGTGGT GAGAGGCCAG ATCTCGATTC TCCTTAAATG CTGTACTTTT
  TTGGTATACA AAGGCATAAA CCACGGTGTC TTTCTGCATA GCACATAAAG AATGTGTCAT
  TTTGGTTGAT TGGTTGATTG TCAATCCCTA TCTTAATGGC TAAAGAGAAA TGAATTTTAG
  TTCCGTTCAT GGATTTTAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48134386	NES11822563	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32183755					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48134386	NES11822563	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:142419067 () rs orientation: forward

Symbol	Name	Function Class
Gys2	glycogen synthase 2	232 bp upstream
Rr640649	regulatory region 640649	1789 bp distal
Rr640650	regulatory region 640650	243 bp distal
Rr640651	regulatory region 640651	27 bp distal
Tssr63950	transcription start site region 63950	536 bp upstream
Tssr63951	transcription start site region 63951	501 bp upstream
Tssr63952	transcription start site region 63952	459 bp upstream
Tssr63953	transcription start site region 63953	425 bp upstream
Tssr63954	transcription start site region 63954	356 bp upstream
Tssr63955	transcription start site region 63955	344 bp upstream
Tssr63956	transcription start site region 63956	226 bp upstream