rs32189179 SNP Detail

Summary

• ID
  rs32189179
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73057325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACGAAACGG CGACGGGAAG CTAGCTCCCC ACCCAGAGCT
  TGAACTTGGA CGCGGCCAGA CCCGTGCGCG TGACCACACC GCCACCTCCC GGCGCGACTC
  S
  ACAACCTAGA TAATCCTAGC AAAGCACCAA GGAAGCCCAG CAAGTTCAGG ATTAAATTTT
  ATCAGCTGTC AGGGAGCAGA TCTGGTCGGG GCTTCCCGC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss39372702	mCV24807038	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs32189179					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73057325 () rs orientation: forward

Symbol	Name	Function Class
Ago2	argonaute RISC catalytic subunit 2	548 bp upstream
Cpgi7161	CpG island 7161	within coordinates
Rr369949	regulatory region 369949	1458 bp upstream
Rr404436	regulatory region 404436	205 bp downstream
Rr504021	regulatory region 504021	51 bp distal
Rr504022	regulatory region 504022	218 bp distal
Rr504023	regulatory region 504023	4 bp distal
Rr504024	regulatory region 504024	950 bp proximal
Rr504025	regulatory region 504025	1536 bp proximal
Tssr134684	transcription start site region 134684	505 bp upstream
Tssr134685	transcription start site region 134685	220 bp upstream
Tssr134686	transcription start site region 134686	193 bp upstream
Tssr134687	transcription start site region 134687	159 bp upstream
Tssr134688	transcription start site region 134688	125 bp upstream