rs32190334 SNP Detail

Summary

• ID
  rs32190334
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36727265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAGCACTG GAGAATTGGT
  AAAGCTCCCT ACTCTCACTG GTCAGCATAA ACGCCCTCTG GTCCCAAGGG AGGGCTGTTG
  AGCTTGCAGC CACCCCGTGG TGTCCTGGTC TTCTTACTGA TGCTTCGTTC TCGGACCTCT
  ACCCCTGGGT GAGTGCTCTC TCTGTCTCTG TCTCTCTTTC TCTGACGGTT TTTCTCTTGG
  Y
  TTCTCTTGCA CACTGCTGAA AAAATCCTAC GCTTAGGCAA ACCATCCTCC CTCAGGCTCT
  GAGCCCCACA CACAGCTCGT GCACTGGTCC CGCAGCTCAG CTGCTAGTTC ACTGCGTGGC
  TGGTGATCTG TTTTGGCTGC CTCTGTTTCT AGCTATCACA TTTGTACTAG AGACACCGGG
  GAACGGGGAA GTCACTTGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39373231	mCV23782643	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss147608200	ENSMUSSNP2018836	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32190334					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36727265 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	within coordinates
Cpgi7034	CpG island 7034	315 bp proximal
Gm41297	predicted gene, 41297	within coordinates
Gm49263	predicted gene, 49263	1785 bp downstream
Tssr131078	transcription start site region 131078	1744 bp downstream
Tssr131079	transcription start site region 131079	696 bp downstream
Tssr131080	transcription start site region 131080	642 bp downstream
Tssr131081	transcription start site region 131081	620 bp downstream
Tssr131082	transcription start site region 131082	325 bp downstream
Tssr131083	transcription start site region 131083	149 bp downstream
Tssr131084	transcription start site region 131084	80 bp downstream