rs32190818 SNP Detail

Summary

• ID
  rs32190818
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:97840128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAATTATC TATCTGTGTG
  TGAGTCTCTG TGCAGTCTAA CAGTTCTCAA GAAGGTATTC TGCCCCCTAA AGGAATGTTT
  TGGAATATGT AGAGAAAAAA ATTTGATATG CCCAAGCTAT ACTTACTTTA ATGTGTTTTT
  CTTTTGTTTA AATTTTATAT GAAATTAAGC AATATATTGA TTTTTTTAAA AGTATGATTA
  Y
  ATCATGTAAG AACTTTATTC CAAGGGTGAA ATCCTTATAG AAAGACCTAG AAAAGCAGCA
  CTTGGAATTC CAGGGCAGGA GATGAGGAAT TTGGGGCCAT TCTCAGCTAG GAAGCCAATT
  GTGGGCAAGC CTGGGCCTCG AGAGATCATG TCTTAGATAA ATACATATTT TAAAAAGAGG
  GTGTTAATTT GATTTCGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46115535	mCV23541647	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss145464719	ENSMUSSNP265276	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32190818					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:97840128 () rs orientation: forward

Symbol	Name	Function Class
B3gnt6	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6	1494 bp downstream
Rr381185	regulatory region 381185	1726 bp downstream
Rr651557	regulatory region 651557	123 bp distal
Rr651558	regulatory region 651558	914 bp proximal
Rr651559	regulatory region 651559	1120 bp proximal