rs32190841 SNP Detail

Summary

• ID
  rs32190841
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:79767646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGAGTGAA GCTGAAAAGA
  ATATGATATG GTAGACTTGG GGGTGCACAG TAATGCTCAG CTAAGGCTTA AAGCTACAAA
  GGAGACAGCC TCAAACCTTC CCTTCACTCC AACTGTATAT ATGGTTAGAA GCGATAGATT
  TTATGCATCA AGAGGATGCA TAAAATAGCT TCCGGAGACA TTTCAACTAA AAAGTGTACC
  R
  GAGTGTGGGA CCGTGCTTGG GAACACATGC TTGGTTTTGA TGGTGTTGGG GTCTAAACTC
  AGGGCCTTGT GCATGCAATG TTCTCTGTCA CTGAGCCGTT TCCTCTCCCC CTGGTGCTCT
  GCTGATAAAA ACATGAGTGA CGTCTCACTA GTAAAGATAG AGGGAGGGGC AGGAGGAGCC
  TGGGCCTCTC ATGTTCTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss49323078	NES12597785	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs32190841					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49323078	NES12597785	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79767646 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Elf1	E74 like ETS transcription factor 1			Intron
				Noncoding-Transcript-Variant
Gm9243	predicted gene 9243			306 bp downstream
Rr496131	regulatory region 496131			within coordinates
Rr496132	regulatory region 496132			479 bp distal
Rr496133	regulatory region 496133			1844 bp proximal
Tssr126802	transcription start site region 126802			467 bp upstream
Tssr126803	transcription start site region 126803			486 bp upstream