rs32193288 SNP Detail

Summary

• ID
  rs32193288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:79628390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCGGTGCAG GGCTGTGGCT CCTGTCACGT CTTAAGCGCC
  TAGTCATTTA CTCGCCCTAA TCTCTGGACT GTTCGTCTCA CGCTGGTTAT TAGGCTTCTG
  Y
  CCTAGATGAT GTAAAACTGT TTTCCGAGTT AACTTTTATT CTTTTGTGCA GTGGAAACCC
  TGCTTAATAC CACGAACACT CTTGGTTTAG AATCCATTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	MOLF/EiJ
ss49323470	NES12571595	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	MOLF/EiJ
rs32193288					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49323470	NES12571595	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:79628390 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6774	CpG island 6774	within coordinates
Naa16	N(alpha)-acetyltransferase 16, NatA auxiliary subunit	162 bp upstream
Rr404230	regulatory region 404230	4 bp downstream
Rr496090	regulatory region 496090	183 bp distal
Rr496091	regulatory region 496091	226 bp distal
Rr496092	regulatory region 496092	within coordinates
Rr496093	regulatory region 496093	138 bp distal
Tssr129900	transcription start site region 129900	1529 bp upstream
Tssr129901	transcription start site region 129901	297 bp upstream
Tssr129902	transcription start site region 129902	207 bp upstream