rs32199270 SNP Detail

Summary

• ID
  rs32199270
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135253467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGG GATGTAGGGA GACACAGTGG
  R
  ACACAGAGAC ACACTGTCTC TGTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45118893	mCV23633438	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145530787	ENSMUSSNP2784536	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss319989140	CHEV_1_137222306	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32199270					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135253467 () rs orientation: forward

Symbol	Name	Function Class
Gm41956	predicted gene, 41956	1063 bp upstream
Lmod1	leiomodin 1 (smooth muscle)	within coordinates
Rr12584	regulatory region 12584	867 bp distal
Rr28593	regulatory region 28593	within coordinates
Tssr8958	transcription start site region 8958	909 bp downstream
Tssr8959	transcription start site region 8959	873 bp downstream