rs32199421 SNP Detail

Summary

• ID
  rs32199421
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144416938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC TTTCTTCACT ATCAAAGATA
  W
  GGGTGTGATG CTGTTTCATG TGTGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46116339	mCV24316519	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss145992517	ENSMUSSNP3874530	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss322484933	CHEV_7_152049106	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32199421					SNP	A	A	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144416938 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20003	CpG island 20003	802 bp distal
Cpgi20004	CpG island 20004	235 bp distal
Fgf4	fibroblast growth factor 4	within coordinates
Rr366757	regulatory region 366757	1812 bp downstream
Rr366758	regulatory region 366758	259 bp upstream
Tssr70358	transcription start site region 70358	1806 bp downstream