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rs32200696 SNP Detail
Summary
  • ID
    rs32200696
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr15:100721722 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
               ATGTCGTAAA TAGAACTGGG AATAAGATGT GCAATTGTGA TCACCCTGTA
    R
    CAATGTATGG TAGACATGAG GCCCCGGGGC AGGTGACTTG GTGTGTCTCT           
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss48136313 NES12124391 PERLEGEN MM_PANEL2 f SNP A A A A A G A G A A A
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs32200696 SNP A A A A A G A G A A A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss48136313 NES12124391 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:100721722 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi7752 CpG island 7752 1277 bp proximal
Gm35569 predicted gene, 35569 1838 bp downstream
Rr301632 regulatory region 301632 1522 bp distal
Rr308909 regulatory region 308909 1166 bp distal
Rr312513 regulatory region 312513 1522 bp distal
Slc4a8 solute carrier family 4 (anion exchanger), member 8 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory