rs32200696 SNP Detail

Summary

• ID
  rs32200696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:100721722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             ATGTCGTAAA TAGAACTGGG AATAAGATGT GCAATTGTGA TCACCCTGTA
  R
  CAATGTATGG TAGACATGAG GCCCCGGGGC AGGTGACTTG GTGTGTCTCT           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48136313	NES12124391	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32200696					SNP	A	A	A	A	A	G	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48136313	NES12124391	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100721722 () rs orientation: forward

Symbol	Name	Function Class
Gm35569	predicted gene, 35569	1838 bp downstream
Rr509843	regulatory region 509843	1684 bp distal
Rr509844	regulatory region 509844	1139 bp distal
Rr509845	regulatory region 509845	1428 bp proximal
Slc4a8	solute carrier family 4 (anion exchanger), member 8	mRNA-UTR