ATGTCGTAAA TAGAACTGGG AATAAGATGT GCAATTGTGA TCACCCTGTA R CAATGTATGG TAGACATGAG GCCCCGGGGC AGGTGACTTG GTGTGTCTCT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss48136313 | NES12124391 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | G | A | G | A | A | A |
SNP Consensus Information | ||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32200696 | SNP | A | A | A | A | A | G | A | G | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss48136313 | NES12124391 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr15:100721722 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi7752 | CpG island 7752 | 1277 bp proximal | ||||||
Gm35569 | predicted gene, 35569 | 1838 bp downstream | ||||||
Rr301632 | regulatory region 301632 | 1522 bp distal | ||||||
Rr308909 | regulatory region 308909 | 1166 bp distal | ||||||
Rr312513 | regulatory region 312513 | 1522 bp distal | ||||||
Slc4a8 | solute carrier family 4 (anion exchanger), member 8 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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