rs32204320 SNP Detail

Summary

• ID
  rs32204320
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:40518115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTGGCATT TGTGATCAGC
  TGGCTTTCGC TGGGGACTTT GCCAGTGGCC TAACCTTCCT GCCAAGAAAC TGTGAGGGCG
  GAGGGCAGGG GCTCCAGGAG GGGAGCAGTA ACTGGAAGCA CAAAGTTTAT GGAAGGAGAC
  TGAGATTTCT TTGTGCCCTG CTAGATGGGC GAGGCATTAG GGAGGAGAGT TAGAGGGTCC
  R
  TTGGAAGAGG CTGTTGGAAG AAGTTGCTGG AAGGGGAGCG GGGGAAGGGT GGCCTGGCAG
  CTGCCCAGCA TTGACGCGGT GACAAATGCA GAAGGTGGCC CCCTCCAAAC CTCACGTCTC
  CCCCCACCCC ATCAACCCCT TCAACTCCCA CCCACGCCGC GATCCCCTTG CACTCCACGC
  GACCGAGGCC GGGCTGTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss39375050	mCV23354250	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs32204320					SNP	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss147693550	ENSMUSSNP7013539	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:40518115 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7065	CpG island 7065	within coordinates
Gm63080	predicted gene, 63080	within coordinates
Rr501588	regulatory region 501588	within coordinates
Rr501589	regulatory region 501589	327 bp proximal
Rr501590	regulatory region 501590	890 bp proximal
Tssr4586	transcription start site region 4586	576 bp upstream
Tssr131170	transcription start site region 131170	162 bp upstream
Tssr131171	transcription start site region 131171	193 bp upstream
Tssr131172	transcription start site region 131172	275 bp upstream
Tssr131173	transcription start site region 131173	301 bp upstream
Tssr131174	transcription start site region 131174	350 bp upstream
Tssr131175	transcription start site region 131175	489 bp upstream
Tssr131176	transcription start site region 131176	540 bp upstream
Tssr131177	transcription start site region 131177	589 bp upstream
Tssr131178	transcription start site region 131178	618 bp upstream
Zfpm2	zinc finger protein, multitype 2	323 bp upstream