rs32205161 SNP Detail

Summary

• ID
  rs32205161
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56546404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGTTTTC TTGGTGCTGA
  GGATGAAAGC CAGAGCCTGG CTCATGCGAG ACAAGGACCC CACCTCTGCT CTACATCGCT
  ATCCCTCAGG AGTTTGAAAT GCTACAGCTT CTGGAACTCT AATAGCTATG CCCCTGAAAC
  CCCCATCTGA GCTGGCAAGT AGGCCAGGGC AGCGGCTAAC AGGACAGACT TTTCCTCAGG
  W
  CTGCTGGGTC CTAGCCTCCT CAAAGTGACT GTGCTCTGGT TTGTTTTGGG GCCAAAAGGG
  TTATGAATTA CCTTTCCCAT GATATTCTTA GAGAGCTACC TAGCCTCTGA GTAGCACTAT
  TTAAACCTCT GGTTGATGTT CACCCTTAAG AAACACCTTT AAGGGCTAGA GAGATGTCTC
  AGCGGTTAAG AACACTGACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49325537	NES12719913	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	T	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32205161					SNP	A	A	A	A	A	A	T	A	A	T	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49325537	NES12719913	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56546404 () rs orientation: forward

Symbol	Name	Function Class
4930511P09Rik	RIKEN cDNA 4930511P09 gene	within coordinates
Gramd2b	GRAM domain containing 2B	within coordinates
Rr538167	regulatory region 538167	within coordinates
Tssr5323	transcription start site region 5323	1182 bp downstream