rs32206412 SNP Detail

Summary

• ID
  rs32206412
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161080392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACA CCACAATAAA GAGACTGGAT
  K
  CAGACTCAAA GTGGCTGATC TCTAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45119240	mCV24544651	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32206412					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161080392 () rs orientation: forward

Symbol	Name	Function Class
Cpgi926	CpG island 926	1392 bp distal
Gm70781	predicted gene, 70781	within coordinates
Prdx6	peroxiredoxin 6	1612 bp upstream
Rr396460	regulatory region 396460	1473 bp downstream
Rr396461	regulatory region 396461	1011 bp downstream
Rr421777	regulatory region 421777	1668 bp distal
Rr421778	regulatory region 421778	1113 bp distal
Rr421779	regulatory region 421779	within coordinates
Rr421780	regulatory region 421780	1273 bp proximal
Rr421781	regulatory region 421781	1834 bp proximal
Tssr14577	transcription start site region 14577	1913 bp upstream
Tssr14578	transcription start site region 14578	1683 bp upstream
Tssr14579	transcription start site region 14579	1678 bp upstream
Tssr14580	transcription start site region 14580	1636 bp upstream
Tssr14581	transcription start site region 14581	1294 bp upstream