rs32207458 SNP Detail

Summary

• ID
  rs32207458
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102619329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAG GACCGTTTCT TTCACTTCTG
  R
  GCTTGAAACT ATCCCATGAG TTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45620394	mCV23032620	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
ss147134492	ENSMUSSNP505087	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32207458					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102619329 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14510	CpG island 14510	1646 bp distal
Rr596308	regulatory region 596308	1597 bp distal
Rr596309	regulatory region 596309	1109 bp distal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1	within coordinates
Tssr38069	transcription start site region 38069	1948 bp downstream
Tssr38070	transcription start site region 38070	1854 bp downstream
Tssr38071	transcription start site region 38071	1757 bp downstream