rs32207865 SNP Detail

Summary

• ID
  rs32207865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56543694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAGAGAC TATATTAAAG
  TGTCACAGCT TTAGGAAGGT TGAGAGGGCC TAGATTACAG TCACTCCCTA GGTTGCTTAG
  ATAAGGGAGG AAAGTGACAA GTCTTCTGTG TTGCTAAGGA AATAGAACCA ACAGAAACAA
  AATTAGCTAC GGAAATGAAT GCCCTGATGG ACCCATCCTA GCCAACTTCA CTGCACTTCA
  Y
  CTGGCTTGAG ATCGAATCTA GTGTCAAAAC TCAATGGTCA TTTAGTTCCA TTTATTTATC
  TCACCTAGGA TAGCCTTTCG AGCCCCAGAA GAGACAGTCA GAAACAGGCA TCATACTGTG
  TAAAAGAAAA ATCTGGGATT CCTGAGCCTA TACTGACTGT TAAACAATTC TGCTAGTTTC
  CAGTAAATGG GCAGATGTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49325565	NES12720015	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	C	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32207865					SNP	T	T	T	T	T	C	T	T	C	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49325565	NES12720015	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56543694 () rs orientation: forward

Symbol	Name	Function Class
4930511P09Rik	RIKEN cDNA 4930511P09 gene	within coordinates
Gramd2b	GRAM domain containing 2B	within coordinates
Rr538167	regulatory region 538167	1903 bp proximal
Tssr5323	transcription start site region 5323	1517 bp upstream