rs32210529 SNP Detail

Summary

• ID
  rs32210529
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:122242884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAG ACAGGTGGGC TTATCTTCTC
  K
  TGCAGGGGCT GATCCTGAAG AGACC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45755591	mCV24886948	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss321668831	CHEV_5_122554830	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32210529					SNP	G	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:122242884 () rs orientation: forward

Symbol	Name	Function Class
Myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	within coordinates
Rr108983	regulatory region 108983	within coordinates
Rr108984	regulatory region 108984	1517 bp proximal
Rr124298	regulatory region 124298	within coordinates
Tssr48628	transcription start site region 48628	1940 bp downstream
Tssr48629	transcription start site region 48629	1900 bp downstream
Tssr48630	transcription start site region 48630	1846 bp downstream
Tssr48631	transcription start site region 48631	1654 bp downstream
Tssr48632	transcription start site region 48632	1634 bp downstream
Tssr48633	transcription start site region 48633	1065 bp upstream
Tssr48634	transcription start site region 48634	1961 bp upstream
Tssr53076	transcription start site region 53076	922 bp upstream
Tssr53077	transcription start site region 53077	1971 bp downstream