GGTCC TGGGTCCTGG GATTCCACTG R AGGAGGTGAT CAAGGCCAGA GCAGT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss39375339 | mCV24773978 | ABI | CRAMUS_MOUSE | f | SNP | A | G | A | A | ||
ss148254505 | ENSMUSSNP5231646 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | ||||
ss325039409 | CHEV_15_84530989 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32211629 | SNP | A | G | A | A | A | G |
Location: Chr15:84584760 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Prr5 | proline rich 5 (renal) | within coordinates | ||||||
Rr304869 | regulatory region 304869 | within coordinates | ||||||
Rr304870 | regulatory region 304870 | 1241 bp proximal | ||||||
Rr314875 | regulatory region 314875 | 1161 bp distal | ||||||
Rr314876 | regulatory region 314876 | within coordinates | ||||||
Rr314877 | regulatory region 314877 | 1340 bp proximal | ||||||
Rr404546 | regulatory region 404546 | 1482 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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