rs32212072 SNP Detail

Summary

• ID
  rs32212072
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:3380768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCAAAAAG CTACACCGAT
  ACAGGTTTTA GATATCAGCA GAAAGTGAGT GCAGGAAAGA GTCCGAGAAA GCAGCATGAC
  TATTAATCCA TCCAAAAGAT GTTGTGTCGT ACTCCTGATG GGTACCATGC TTTCCATATT
  GAAGAAGCTG CCTTATGAGT AGGTGTTTGT TCTCACCCTT AGAAAATCAG TGGGTTCAGT
  S
  TCATGCTACA ACATTGTAGG GCCTTTCATA ACTTCTGGAA GACTCGAAGG AGTCCCTGGC
  TTGAGGACAA ATTTTTGAAG ACTGAAGAGA TTGCATTTCT CCTGTTGCTG AATAATGTTG
  GATAGTCAAG ACAAAGATAT AGACATACAT TTCTTCATGT TAGCTTGTTT GGAGTCTTTG
  ACCCACATAC AGATTGAAAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48138090	NES12127485	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G		C	G	G	C		G
ss325087688	CHEV_16_3562904	CHEVERUD	SCREENING_POP	f	SNP											G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32212072					SNP	G	G	G	G	G	G	C	G	G	G	G	C	G	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48138090	NES12127485	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:3380768 () rs orientation: forward

Symbol	Name	Function Class
Gm61615	predicted gene, 61615	within coordinates
Tssr136819	transcription start site region 136819	922 bp upstream