rs32213071 SNP Detail

Summary

• ID
  rs32213071
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:152914559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cctataaag gaaactgttt aactggggct
  ggcttacagt ttcagaggtt cagtccttta tcgctatagc ggagtatggc agcatgcagt
  catatgtggt gctgaagagt tctacatctt gatccacagt cagcagaaaa agactgtgtt
  Y
  cacacattgc ttgagcatat gagacctcaa agcccacctc acagtgacac acttccttca
  gggccacacc tactccaaca aggccacaac tcctaatagt gccactcctt atggcccaag
  tgttcacata catgagtcta ttcaaaccac                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45120394	mCV24633933	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss320070025	CHEV_1_154885938	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32213071					SNP	T	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152914559 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D1Ertd182e	DNA segment, Chr 1, ERATO Doi 182, expressed			405 bp proximal
Nmnat2	nicotinamide nucleotide adenylyltransferase 2			Intron
				Noncoding-Transcript-Variant
Rr420580	regulatory region 420580			603 bp distal
Rr420581	regulatory region 420581			1149 bp proximal
Rr420582	regulatory region 420582			1544 bp proximal
Rr420583	regulatory region 420583			1723 bp proximal