rs32213515 SNP Detail

Summary

• ID
  rs32213515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161320753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggtctccc tccaaaaacc ccctcttctt
  atcccctccc cctctccctg ctcaccaacc cactcccact cccactttct ggccctggca
  ttcccctaca ctgggacatt gagccttcac aggaccaagg cctcttcctc cattaatgac
  Y
  gactaggcca tcctctgctc catatgtagc tggagctatg agtcccacca tgtgtactct
  ttggatggtg gtttagtctc tgggagctct gggggtactg gttaattcat attgttgttc
  ctcctgtgga gctgtaaacc cttcaactcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45120486	mCV23101307	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss320080914	CHEV_1_163423315	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32213515					SNP	T	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161320753 () rs orientation: forward

Symbol	Name	Function Class
Rr421810	regulatory region 421810	1152 bp proximal
Tnfsf18	tumor necrosis factor (ligand) superfamily, member 18	1471 bp upstream
Tssr9690	transcription start site region 9690	1465 bp upstream