rs32213704 SNP Detail

Summary

• ID
  rs32213704
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:3382633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAAATAC AGAAGAATAT
  CCCAAAATAC TTACTTTAAT TTTCATAGAG GTAAAGTTTG AAGCAAAGGG ATATTATCAG
  GACTTTTGTG AAAGGTAGAT ATTTAGTGGT TTCTAACTTT TGTCAACATG GATAACCAAG
  GACAACTAAA TTCAAAAGAA AAAGTGGGAA AGAACACTGA AGATCTTTGA GGAGGTAGTA
  R
  GAAGAGCTAG AGAGATGGAA AAACAGTTAG CAGTACTGGC TGGTCTTGCA GAGGACATGG
  ATTCTCTTCT TAGCATGCAC TTGGTAGTTC ACAACCATTT GTAACTCCAG TTTTATGGAT
  CTGCTGACTC CTTTTGACTT TCCAGGGCAT AGGCATGCAC ATTGTCATGT GTAAACCCAA
  GTAGAACCAC TCTTATCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48138102	NES12127491	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A		G	A	A	G		G
ss325087695	CHEV_16_3564769	CHEVERUD	SCREENING_POP	f	SNP										G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32213704					SNP	A	A	A	A	A	G	A	A	A	G	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48138102	NES12127491	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:3382633 () rs orientation: forward

Symbol	Name	Function Class
Gm61615	predicted gene, 61615	within coordinates
Tssr136819	transcription start site region 136819	938 bp downstream