rs32214047 SNP Detail

Summary

• ID
  rs32214047
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:171016751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGCTGACGA GACCCCCCCC CCCCAGTGTT CAATGGAAGC
  CACTGCTACC CGCCTTACAG AAGCCTCTGG GATCCCGTGC CCCTGTGCGA CCCCGGACTG
  M
  TGTTTTTGGA GATCTGTTGG AACTGTTTCA ACTCTTTCTG CGCAGTAACC AGCTGCAGTC
  CTCAAACAGC TTCAGAAAGG CTTGCTCAAG GTCACCCTC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45120001	mCV24421028	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	A
ss119995958	PARCsnp_1.12056	PARC_SEQ	INBRED	f	SNP				C	A
ss119997552	PARCsnp_1.01045	PARC_SEQ	INBRED	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32214047					SNP	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171016751 () rs orientation: forward

Symbol	Name	Function Class
Gm70111	predicted gene, 70111	479 bp upstream
Pcp4l1	Purkinje cell protein 4-like 1	Intron
Rr423235	regulatory region 423235	546 bp distal
Rr423236	regulatory region 423236	within coordinates
Rr423237	regulatory region 423237	490 bp proximal
Rr423238	regulatory region 423238	1143 bp proximal