rs32214100 SNP Detail

Summary

• ID
  rs32214100
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136506610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGATGCACC TCAATGAATG CACAGCTACA AAGCTCTGAT GTTCATGGCA CAGCCGTGTG
  TCATCTATAG CCAAGGGTGG TTGTAAAGAT GCTTAGAAAT ACCTTTATGT GCCCTGAGGT
  TGGGCTGCAC ACCTTTGATC CCAGCCCTTG GGAGAAAGAG GCAGGAGGAT CTCTGTGAGT
  TTGAGGCTAG CCTGGTCTAC AGAGCGTGTT CCAGGACAGA TAGACAGGAG TATACAGAGA
  AATCTTATCT GGAAAAAAGA AAAAGAAAGA AACACACACA CACACACACA CACACACACA
  S
  ACACACACAG AGAGAGAGAG AGAGAGAGAG AGACTTCATG CCATCCAATG GCTTCCACTT
  TTTAAGTGTT CCAGCTAACT TATAAAAAGA AACTGTCTAG GGCTGGAGAG ATGGCTCAGC
  CATTAAAAGC ACTATCTGCT CTTCCCGAGG TCCTGAGTTC AATTCCCAGC AACCACGTGG
  TGGCTCACAA TCATCTGTAA TGGGATCTGA TGCTTCTGGG ATGTCCAAAA ACAGAGACAG
  TATACTCACA TACATAAAAT ATATAAATCT TTTAAAAGGA GAAAAGAAAA AAAAAAAAAA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45120602	mCV23236773	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32214100					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136506610 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm33994	predicted gene, 33994	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr367011	regulatory region 367011	632 bp upstream
Rr419471	regulatory region 419471	409 bp distal
Rr419472	regulatory region 419472	471 bp proximal
Rr419473	regulatory region 419473	595 bp proximal
Tssr9072	transcription start site region 9072	768 bp upstream
Tssr9073	transcription start site region 9073	794 bp upstream
Tssr13942	transcription start site region 13942	1657 bp downstream
Tssr13943	transcription start site region 13943	1682 bp downstream
Tssr13944	transcription start site region 13944	1709 bp downstream