rs32214786 SNP Detail

Summary

• ID
  rs32214786
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:3778341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGCATGG ATACTAGCCT
  TCCTCTAGTA CAAAACAACA AATGGCAGAA AATTACCACA AAATTAACTT TTAAGTTTAA
  AAAAGGCTTG CCTTTCTGTG CCTGGAAAGG AGTTCCAGAG GCATACAGTG GGTCCACTCA
  GTTTTGCTTC CTGAGTTGAG AACTATTTAG TTCTGTAGCC AACAGCTTAG GATGGAGCTC
  R
  TCACGAGAAT CCCTGCAATG TTTGAGTGGA GTGTCTTCCA AGGAGTTCAG GATCCTGGTA
  CCAGGGCCAC CAGGAAGGTG AAGGGAAGCT AAGTGGACCA GGCCCTTCAA TGCCAACAGT
  TCTCCCTTTG TGCCTTTTAT TTGGTGCTTT TCAAATGAGC TCCATCACTT AAAAATAAGT
  CTGAGCCAGG TGTAGTGTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48139149	NES12122491	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32214786					SNP	A	A	A	A	A	A	G	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48139149	NES12122491	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:3778341 () rs orientation: forward

Symbol	Name	Function Class
Nlrc3	NLR family, CARD domain containing 3	within coordinates
Rr326802	regulatory region 326802	878 bp distal
Tssr139740	transcription start site region 139740	1005 bp upstream
Tssr139741	transcription start site region 139741	966 bp upstream