rs32215255 SNP Detail

Summary

• ID
  rs32215255
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:45159962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATTGGTCCA CGCTGACTCT GAGCTTCCGC CCGCGTTAAC
  GGCCCCGCCC CTTTCCGATG AGGTTTCCTT ATCTTTGAAA ATCTTTCCGG TTTTCTTGGA
  M
  GCTCACAGTC TTCAACGCAA CATTTCCTGC GTCCGTTTTC AAGTAAAACT CAAAGCCCTG
  CATGCCCAGG GATTGGGGGA GGGGGTGAGA CAGGACAAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46118551	mCV22698127	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C	A
ss149136097	ENSMUSSNP2322301	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32215255					SNP	A	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45159962 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm45478	predicted gene 45478			1819 bp downstream
Nucb1	nucleobindin 1			149 bp upstream
Rr400313	regulatory region 400313			within coordinates
Rr646472	regulatory region 646472			223 bp distal
Rr646473	regulatory region 646473			within coordinates
Rr646474	regulatory region 646474			501 bp proximal
Tssr72423	transcription start site region 72423			178 bp upstream
Tssr72424	transcription start site region 72424			139 bp upstream
Tssr72425	transcription start site region 72425			125 bp upstream
Tulp2	TUB like protein 2			Intron
				Noncoding-Transcript-Variant