rs32217389 SNP Detail

Summary

• ID
  rs32217389
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100578836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAACCCCC CCCCCCCCAA
  GATCACCAGG GTAAAGTGCA ACAGTGGTAC AGTGTAACAA AAGGGACTGA TGGGGCTGAG
  ACCACCTGCC ATACAGTTAA CTGCCTCGGT CCCCAAAGGC CGGGCCCCTT GCTACCATTA
  AAAGAATATA GGTCACAAGC AACTACTAAA AAATACACAA GGAGGTACAG GCAGGCTAGG
  M
  CACACTGCAG CTTTTGAAAT ACTGATATTG AGCGAGGAAC TCTCATGTCC CCTCCCACTT
  GGAGGTTCTG TGATAGAGTA GGAAGCTGAG TCTGTCCACC GGCACAAGAG CAGGTGAGGA
  ACAGACAGAG TGTAAAAGGC GGGGTGACCA GTGGAGGCCC CTGGGGCTCA CCCCTGCATA
  CACTTACCTG GCATCCAGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39376735	mCV22765576	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss325083842	CHEV_15_100511386	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32217389					SNP	C	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100578836 () rs orientation: forward

Symbol	Name	Function Class
Cela1	chymotrypsin-like elastase family, member 1	within coordinates
Gm62586	predicted gene, 62586	94 bp upstream
Rr301613	regulatory region 301613	1965 bp proximal
Rr312498	regulatory region 312498	within coordinates
Tssr136477	transcription start site region 136477	222 bp downstream
Tssr136478	transcription start site region 136478	614 bp downstream
Tssr136479	transcription start site region 136479	929 bp downstream
Tssr136480	transcription start site region 136480	965 bp downstream
Tssr136481	transcription start site region 136481	985 bp downstream
Tssr136482	transcription start site region 136482	997 bp downstream
Tssr136483	transcription start site region 136483	1003 bp downstream
Tssr136484	transcription start site region 136484	1073 bp downstream
Tssr136485	transcription start site region 136485	1105 bp downstream
Tssr136486	transcription start site region 136486	1877 bp downstream
Tssr136487	transcription start site region 136487	1965 bp downstream
Tssr136488	transcription start site region 136488	1993 bp downstream