rs32217961 SNP Detail

Summary

• ID
  rs32217961
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155316815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGGTAAGG GGCTGAGCAG TCAAGGTGAG TTGGCTTACA
  GGGCTCACAC ACCACCACCA CCAAGAGGGT TCAGGGCAGG AGATATTTTC AGGGTCAGAC
  Y
  CCAGAGGCCG TGAGGAGACC CTACAGCAGA CCCTCACCCA GACTTTTTTT TTTAAAGATT
  TATTTACTTA TTTATTTATT TATTATATGT AAGTACACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45621692	mCV22847359	ABI	CRAMUS_MOUSE	f	SNP		C	C					T		C
ss46777498	NES11004366	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	T	C		C	C	T	T		T	T	C		T
ss148112860	ENSMUSSNP3605492	ENSEMBL	ENSEMBL_Sanger	f	SNP		C								C
ss321441322	CHEV_4_154606467	CHEVERUD	SCREENING_POP	f	SNP													C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32217961					SNP	C	C	C	C	C	T	C	T	C	C	T	T	C	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46777498	NES11004366	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155316815 () rs orientation: forward

Symbol	Name	Function Class
Gm52713	predicted gene, 52713	1749 bp upstream
Rr88175	regulatory region 88175	1386 bp proximal