rs32222408 SNP Detail

Summary

• ID
  rs32222408
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:190804030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTT ACTGCTCTAG TGAGTTATCT
  R
  ACTTTATCCA GTCCCGTGAA ACTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45121020	mCV23579828	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss146501487	ENSMUSSNP5321157	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32222408					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190804030 () rs orientation: forward

Symbol	Name	Function Class
Nsl1	NSL1, MIS12 kinetochore complex component	Intron
Rr426040	regulatory region 426040	within coordinates
Rr426041	regulatory region 426041	535 bp proximal