rs32223071 SNP Detail

Summary

• ID
  rs32223071
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:40516638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTCTGATT TATTGGTATC
  TCTTTTGCTT TGCATATTTA ACCATTTCAG ATGCCAAAAG AAACACTAAG TGCTGTATTA
  TTTTAATTCC AGGGGACATT CCTTTTGGGT GATGTAAGTC AGCCAATTCT ATGAAAGATC
  TATGAAAACA GTAACGTACA ATAAATCCAA TTCTAAGATT CTGTGCATGC CAATTCAACT
  R
  TAATGATTTG AGAATGAGGG GGCTAAAAAG CTCCAGTCTC TGTTTTTTAA CCCCCCCACA
  CACACACACA CACAAATACA AATAACCTTG CTTTTCATGG TACTTAGGAT CATAATTTGT
  TGGCCCTTGC AGGCAGGGAC TTGGTCATTA ACTGCCTTTT CCGTATCAAG GACCATGTAC
  TGTACTGTCA TAACCTCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39377647	mCV23354544	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147693510	ENSMUSSNP4454802	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32223071					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:40516638 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7065	CpG island 7065	1128 bp proximal
Gm63080	predicted gene, 63080	within coordinates
Rr501588	regulatory region 501588	907 bp proximal
Rr501589	regulatory region 501589	1804 bp proximal
Tssr131170	transcription start site region 131170	1639 bp upstream
Tssr131171	transcription start site region 131171	1670 bp upstream
Tssr131172	transcription start site region 131172	1752 bp upstream
Tssr131173	transcription start site region 131173	1778 bp upstream
Tssr131174	transcription start site region 131174	1827 bp upstream
Tssr131175	transcription start site region 131175	1966 bp upstream
Zfpm2	zinc finger protein, multitype 2	1800 bp upstream