rs32224339 SNP Detail

Summary

• ID
  rs32224339
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99665695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAGTTAC CCCCTTTGTG
  GTAGAGTTAT CCTGTGTGCA TATGAAGGAA GAAAGATAGA GGCTATAAAA CAGTACTAAG
  CGTGCACAGA TAACACAGTG AGACGTAGCA GAGAATCCTC TCATCTGATC AATGCCAGTG
  TCTATTCATC CTGAAATAGC TCTCTTCCCA ACGATCCATC TGAGTATCTG TGCAGATGAA
  Y
  AGACCCTTTG CAACCATTCA GTAAATACCT ACTGATCACA CGCTCAGTGC ACTACAGACT
  CCCTCCACTG CTGACAGGCA GGACCTACTT GTGGAGTTTG GGTTTTGCCT GTGCTGAAGT
  GTAAGCCCGG GACAAGCACT CAATATCCAA CCTATATCCT TAGGCCCACA CTGTAGTTCT
  TGAGCAGAAT AGATAATAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39376967	mCV23428502	ABI	CRAMUS_MOUSE	f	SNP	T		C						C
ss51763818	NES14550585	PERLEGEN	MM_PANEL2	f	SNP	T		C	C	T	C	C	C	C	C	C		T	C	C	C		C
ss148470446	ENSMUSSNP1643178	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C						C
ss325081770	CHEV_15_99598245	CHEVERUD	SCREENING_POP	f	SNP												C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32224339					SNP	T	T	C	C	T	C	C	C	C	C	C	C	T	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51763818	NES14550585	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99665695 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	within coordinates