rs32226283 SNP Detail

Summary

• ID
  rs32226283
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172524703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTG ATGCTGAGAA ATTGACTTTG
  K
  TAGGATGGGA ATGCATCTAA CTAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45121551	mCV24592123	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss146199157	ENSMUSSNP27666	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320126978	CHEV_1_174627267	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32226283					SNP	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172524703 () rs orientation: forward

Symbol	Name	Function Class
Crp	C-reactive protein, pentraxin-related	920 bp upstream
D1Mit149.1	DNA segment, Chr 1, Massachusetts Institute of Technology 149.1	1941 bp proximal
Rr423653	regulatory region 423653	390 bp proximal
Rr423654	regulatory region 423654	758 bp proximal
Tssr10246	transcription start site region 10246	910 bp upstream
Tssr10247	transcription start site region 10247	1853 bp upstream
Tssr10248	transcription start site region 10248	1919 bp upstream
Tssr10249	transcription start site region 10249	1943 bp upstream
Tssr10250	transcription start site region 10250	1998 bp upstream