rs32231357 SNP Detail

Summary

• ID
  rs32231357
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34878256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATAGGGGA CAACAGCACA
  TTCCTTACCG CTTATCATAA TAACATCAGG AAAGAGGATT CGTGGCATCC AAGCAAGTGG
  ATACAATGTG TTCTGCTACA TAGAATGATT TATGGCATCT GGGGCTTAGC TGTATTTATT
  TATTTGTCAA TACAGGAAGT TAGAGGTTAT CTCCTAAGAA ACAGTCAGGA ATGTCACCTG
  R
  GGCTAGAGGA AGCTCTGTCC TACACACTCA CACAGTCAGC TATCACCCTA TCAGCATTTA
  AAATAAACCC TACACTGGAC CCAAAGTGAA TAAAGGCTCT TGCTGCCAGG CCTGATGGTG
  TGAGTTCAAT CCCTGGAATG GAGAAAACCA ACTCCTTTGT AGTTCTGACT CCTACATAAG
  TGCTGTGGCA TGCATGTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39379323	mCV23392482	ABI	CRAMUS_MOUSE	f	SNP	A	G					G
ss49449278	NES12597237	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G	G	G	G	A	G	A	G
ss147562985	ENSMUSSNP3068174	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32231357					SNP	A	G	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49449278	NES12597237	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34878256 () rs orientation: forward

Symbol	Name	Function Class
Rr500781	regulatory region 500781	1189 bp proximal
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	1882 bp upstream
Tssr133983	transcription start site region 133983	1769 bp upstream
Tssr133984	transcription start site region 133984	712 bp downstream