rs32231708 SNP Detail

Summary

• ID
  rs32231708
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117010770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTAACTGCT GGGAAGACTC AATGTCAAAG TCCCAGCCTT
  TCCCGGAACC TGGCTGGAGG TGTAGCCAGC TATGTGCTTA AGATGCCCAG CACACATACA
  M
  CAATTAAAGA ACCCTCAAAA CTCACATCTA CAAAGGAAAG GGGCAGCCTT TCTAGCCATA
  ATACAAGCAT GATTTACACA CACCCTAATG TTGAATCTC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45623039	mCV22659092	ABI	CRAMUS_MOUSE	f	SNP	C		A	C	A
ss147285166	ENSMUSSNP2068759	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32231708					SNP	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117010770 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14653	CpG island 14653	1784 bp proximal
Gm22980	predicted gene, 22980	520 bp downstream
Gm26330	predicted gene, 26330	1613 bp downstream
Rps8	ribosomal protein S8	263 bp downstream
Rr377051	regulatory region 377051	within coordinates
Rr598067	regulatory region 598067	1653 bp distal
Rr598068	regulatory region 598068	244 bp distal
Snord38a	small nucleolar RNA, C/D box 38A	943 bp downstream
Tssr38607	transcription start site region 38607	253 bp upstream