rs32235148 SNP Detail

Summary

• ID
  rs32235148
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70182678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAAAAGC TGGCTGACAT
  AGAATTTCAT TGCAAAGGAT CTCTGAGACG GAACCAGACC TTCGTGATGT AAGACTGACA
  GCTCTTACTT TTATGAACCC CCTGGGTGGA GGTGATGCCA GTATCCCGGT TTGTAGCTTT
  CAAGTGGGCT TCTGTTTTAG AGTCACCCTA AAGAGCGCAT TTCTGATGAG ACGTGAGCTG
  Y
  GGAGAAGGTG ATATTTGAAA ACCATGTGAG TGACCAGGCT TTCGTTTGCA GTTTGATCTG
  ATAAACCTAC ACACTGGAAC CCACAACACA CAGTATCGGA TTTTCTCACT TCCCAGACCT
  CGTCCTAGAC TCCACACACT TGCCACCCAT CTCCCCTATC CGGTTACAAG GCATTGTCAG
  TGCCCAGAAC GCCCTCACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47142742	NES11254362	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32235148					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47142742	NES11254362	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70182678 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	1035 bp distal
Gm56526	predicted gene, 56526	within coordinates
Rr403332	regulatory region 403332	460 bp upstream
Tssr116556	transcription start site region 116556	357 bp downstream