rs32235151 SNP Detail

Summary

• ID
  rs32235151
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70182868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTGAGCTG CGGAGAAGGT
  GATATTTGAA AACCATGTGA GTGACCAGGC TTTCGTTTGC AGTTTGATCT GATAAACCTA
  CACACTGGAA CCCACAACAC ACAGTATCGG ATTTTCTCAC TTCCCAGACC TCGTCCTAGA
  CTCCACACAC TTGCCACCCA TCTCCCCTAT CCGGTTACAA GGCATTGTCA GTGCCCAGAA
  Y
  GCCCTCACCT CTGGAACCTT GAACTCTGAA ATTCCACCCT GCCCTGGGCT TCATATCCAT
  CTCCACTCCT GTGTGTCACC TCTCCAGGCT CCAATCGTCC CAGGGTGCCA TCAGTTCTGC
  CTGTCTCAGA GCCCCAGATG CTCTTGTCAC TCAGGACACA TTCACCACCA GGAACTACGT
  CCTTGCCCCT GTCTCAACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47142745	NES11254363	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32235151					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47142745	NES11254363	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70182868 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	1225 bp distal
Gm56526	predicted gene, 56526	within coordinates
Rr403332	regulatory region 403332	270 bp upstream
Tssr116556	transcription start site region 116556	167 bp downstream