rs32237639 SNP Detail

Summary

• ID
  rs32237639
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70183643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTATTGTG TACTGGCGCT
  GTTCTCCGGG CTAAGCATAC AGTGGAGAAC AGCCAAGCAG CCCCAGTCTC ACGCGTCTAT
  GAGAAGCAAG GGACAGGAAA CCTGGCCAAA TAGACACAAT TAGCTTTATG TATTTATGAC
  TTTACGACCA CAGGTTCAAT CAAGGGTCTT GTTTGAAACA GATAGGTCTT TAAGGGTTTT
  R
  TATGTGCTGA ATTGGAAATA CAGACATGTA CAAATATATA TATATATATG CATATTTTTG
  TATATGTACA TGTATACACA CATGTATAGG TATAGGTATA GGTATAGGTA TAGGTATAGG
  TATAGGTATA GGTATAGGTA TAGGTATAGG TATATGTATA GGTATATGTA TAGGTATATG
  TATAGGTATA CTTTCTTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47142776	NES11254322	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32237639					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47142776	NES11254322	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70183643 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	2000 bp distal
Gm56526	predicted gene, 56526	570 bp upstream
Rr403332	regulatory region 403332	205 bp downstream
Rr467201	regulatory region 467201	581 bp distal
Rr467202	regulatory region 467202	80 bp distal
Tssr116556	transcription start site region 116556	593 bp upstream