rs32238550 SNP Detail

Summary

• ID
  rs32238550
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110229679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACAGCAGC TCTGGGAAAC
  CCTCAGCTAG CAGCCCAAGT CTTCACTGGG CCCTGACGTC CATAAGCGGG GCTGTAGCGC
  CCCCTGCTGG CCACCATGCG TGCTCCCCCA AAGAGCGGTA GAGTAGTACG TGCGGTTTAA
  TAAGTTCTTC TACGTGGGAG TCAGCACATA GTCTTAATGA AAGAGGAAAG AAAGGGGGGG
  R
  AAAAGCAGTT TGCAGATGCC AACTGGGCTC CCCTCCCTTC GTCTTCTCCC CCCTTCCCCG
  ACCTGCACGC GGGCTTGCTG TGCAGGGGCA GTGACTCAGC GCCCACACGC TGCGCGGCGA
  GCAGCTGCTG GCCGGAGGCG GGCGGATGGA CGTGCAGCCG GAACCGTGCG CCTCCGAGGG
  CCTGAGACCT TCATTGTTCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46121504	mCV23101144	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss145645192	ENSMUSSNP2870291	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss322397536	CHEV_7_117773986	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32238550					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110229679 () rs orientation: forward

Symbol	Name	Function Class
Adm	adrenomedullin	652 bp downstream
Cpgi19577	CpG island 19577	1200 bp distal
Cpgi19578	CpG island 19578	within coordinates
Gm28863	predicted gene 28863	within coordinates
Gm72687	predicted gene, 72687	250 bp upstream
Rr400547	regulatory region 400547	within coordinates
Rr653271	regulatory region 653271	261 bp distal
Rr653272	regulatory region 653272	within coordinates
Rr653273	regulatory region 653273	106 bp distal
Rr653274	regulatory region 653274	1241 bp proximal
Tssr68501	transcription start site region 68501	1927 bp downstream
Tssr68502	transcription start site region 68502	941 bp downstream