rs32238818 SNP Detail

Summary

• ID
  rs32238818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153616209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCAGACCT CTTCTGCGCA GCCTGGTACT TGCTACTCGC
  TTTTCCCTCT TCGCCCTCCG GTCCGCCACC ATCCTCTCCA CGACGTGCTG TCCTGCGTCC
  R
  CAACCATGTG CCGCACCCTA GCCACCTTCC CCAACACCTG CCTGGAGAGG TAAGAGGATT
  TTTTTTTTTT TTTTAGCAGT CCGGACGACC AAGTCCCGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45123389	mCV24630544	ABI	CRAMUS_MOUSE	f	SNP	G		A
ss145749138	ENSMUSSNP3367970	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32238818					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153616209 () rs orientation: forward

Symbol	Name	Function Class
Cpgi870	CpG island 870	within coordinates
Gm28513	predicted gene 28513	within coordinates
Rgs16	regulator of G-protein signaling 16	within coordinates
Rr420742	regulatory region 420742	254 bp distal
Rr420743	regulatory region 420743	104 bp distal
Tssr9477	transcription start site region 9477	103 bp downstream
Tssr9478	transcription start site region 9478	72 bp upstream