rs32239101 SNP Detail

Summary

• ID
  rs32239101
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134655367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGTT TAGGGAGCTT CCACCCCAGG
  S
  GTGGTTAGGT CGTGAACACC AGGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45624111	mCV24216206	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C	C
ss147538881	ENSMUSSNP147586	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		C
ss321350006	CHEV_4_134483971	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32239101					SNP	C	C	G	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134655367 () rs orientation: forward

Symbol	Name	Function Class
Rr367744	regulatory region 367744	1978 bp upstream
Rr601869	regulatory region 601869	1774 bp distal
Rr601870	regulatory region 601870	173 bp proximal
Rr601871	regulatory region 601871	1161 bp proximal
Rsrp1	arginine/serine rich protein 1	686 bp downstream
Tssr39592	transcription start site region 39592	1983 bp downstream
Tssr39593	transcription start site region 39593	1453 bp downstream
Tssr39594	transcription start site region 39594	1366 bp downstream
Tssr39595	transcription start site region 39595	1326 bp downstream
Tssr43947	transcription start site region 43947	685 bp upstream