rs32239686 SNP Detail

Summary

• ID
  rs32239686
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44501075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAGCACCA CAGAGCCCTG
  CACGGCAGGG GCTGAGGAGA TGTAGAAGCT GAAGCTGTGA TTCTGGGCAC AGAGCAGCTT
  GCATCTTCCT GTGCCCACCT TCAGTCCAGA GCTCATCTCT CTCCTGAAAG AATGATCCCA
  GAGAAGGCGG CATCTCCCTC ACCTAGTGAT TGGAAAGTTG GCAGTGACCT GAGAACCAGT
  K
  ATGTGGGTGT GGGGTCCACC TGGTCCTGGT CACTCTAGAA GGCAGAGTTC CACTGCAGGG
  GGAGAGGACC TACTGGACCA CGTGAAAGAG GAAGGCATAG CACTGGCCAG GCTGCTGTGC
  TGCAGAAGCC ATGCAAGTCA CCTGTGGTTT TTGTTTTGTT CTTTGAGACC AGATCTCTGT
  ATCCCAGGCT AACTTCAAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46121798	mCV27579185	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32239686					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44501075 () rs orientation: forward

Symbol	Name	Function Class
Akt1s1	AKT1 substrate 1	within coordinates
Cpgi18996	CpG island 18996	994 bp distal
Cpgi18997	CpG island 18997	985 bp proximal
Gm57218	predicted gene, 57218	1612 bp downstream
Mir707	microRNA 707	1880 bp downstream
Rr646238	regulatory region 646238	1634 bp distal
Rr646239	regulatory region 646239	1695 bp distal
Rr646240	regulatory region 646240	within coordinates
Tssr66438	transcription start site region 66438	1625 bp downstream
Tssr66439	transcription start site region 66439	1259 bp downstream
Tssr66440	transcription start site region 66440	1237 bp downstream
Tssr66441	transcription start site region 66441	1125 bp upstream
Tssr72237	transcription start site region 72237	1784 bp upstream