rs32239746 SNP Detail

Summary

• ID
  rs32239746
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:3689878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACAAATGA TCTTTTTTCT
  GACTCAGACT TGCCTAACAA GCTGGTTGCT GTGTCTGTCT TTGGTGTCTT AGGGCTTCTA
  TCACTGTATA AATAAAAAAA TAGAAATAAA AATAAAAACC ATGACCCAAA TTAACTTAGG
  GAGGAAAGAG TTTATTTCAC TGTATACTGC CATATGACAG CCCATCATCA TAGGAAGTTA
  R
  AGCAAGAACT CAAGTCAGGA ACTGAAGCAG AGGCTATGGA GATTGCTGCT TACTGGCTTG
  CTCCCCATGG CTTAGCCTGC TCTCTTATGC CATGCAGGAC CATTTGCCCA GGGATGTCAC
  TGTCCACAGT GAGCTGAGCC CTCCCAAATC AATCATTAAT CAAGGCAGTA CTCTCACAGA
  CTTGTCTACA GGCCAATGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45624059	mCV23809082	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145942437	ENSMUSSNP232973	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32239746					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:3689878 () rs orientation: forward

Symbol	Name	Function Class
Lyn	LYN proto-oncogene, Src family tyrosine kinase	within coordinates
Rr104512	regulatory region 104512	within coordinates
Tssr36344	transcription start site region 36344	1950 bp downstream