rs32244391 SNP Detail

Summary

• ID
  rs32244391
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76495641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGG CAGAAATCCA CCTGCCTCTA
  Y
  CCTTCCTGAG TGCTGGTATT ACAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39379748	mCV24098809	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss148165683	ENSMUSSNP2940162	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss325022261	CHEV_15_76441871	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32244391					SNP	T	T	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76495641 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7242	CpG island 7242	1113 bp proximal
Gm62519	predicted gene, 62519	1396 bp upstream
Rr311946	regulatory region 311946	1159 bp proximal
Slc39a4	solute carrier family 39 (zinc transporter), member 4	942 bp downstream
Tssr135019	transcription start site region 135019	1259 bp downstream
Tssr135020	transcription start site region 135020	1482 bp downstream
Tssr135021	transcription start site region 135021	1524 bp downstream